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Aug. 13-14, 2019, Salmon-Sea lice analysis and geoduck project

Sea lice and Salmon data Start full alignments using pre-determined settings on Mox Created scripts: Salmon: Sea lice: Started running @ 11:40am takes about 4.5-5 hours/sample so alignments should be done in ~4-6 days including rest of analysis (we’ll see). [Read More]

Mon. Aug. 12, 2019

bedtools makewindows -b v074/Pgenerosa_v074.mRNA.bed -n 10 did this: on ostrich had to install ant (followed these directions) BamQC results file:///Volumes/web/metacarcinus/Pgenerosa/analyses/20190806_v074/multisampleBamQcReport.html [Read More]